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Glenn, What is the difference between the two profiles? Is it just colors of the prompt or colors of all the text within the terminal? If it is the color of the terminal prompt then you should be able to modify the .bashrc belonging to root and set the PS1 variable to set the prompt how you would like it to appear. The link below has more information on customizing the terminal prompt color.

http://www.cyberciti.biz/faq/bash-shell-change-the-color-of-my-shell-prompt-under-linux-or-unix/